group members
Franz
Baumdicker
PI
is interested in population genomics of microbes and how mathematical models can help to understand the evolution of bacteria.
Hannah Götsch
PostDoc
works on sampling biases in bacterial genomic databases and machine learning methods for population genetics.
Lukas
Tatzel
PostDoc
AI & Data Science Fellow working on genome-wide association studies and ancestral recombination graphs.
Axel Fehrenbach
PhD student
investigates the evolutionary dynamics of CRISPR systems and their spacer arrays.
Johannes Kippnich
PhD student
is modeling the dynamics of CRISPR-antimicrobials and plasmids, and develops machine learning methods for HGT analysis.
Yuxin
Ning
PhD student
Yuxin studies simulation-based inference in population genetics and pangenomes.
Leonie Wehnert
Master student
looks at pangenome graph construction in plant pangenomes.
Yamin Mazou
bachelor student
works on simulations and visualization of mutation patterns.
group members
Franz
Baumdicker
PI
is interested in population genomics of microbes and how mathematical models can help to understand the evolution of bacteria.
Hannah Götsch
PostDoc
works on sampling biases in bacterial genomic databases and machine learning methods for population genetics.
Lukas
Tatzel
PostDoc
AI & Data Science Fellow working on genome-wide association studies and ancestral recombination graphs.
Axel Fehrenbach
PhD student
investigates the evolutionary dynamics of CRISPR systems and their spacer arrays.
Johannes Kippnich
PhD student
is modeling the dynamics of CRISPR-antimicrobials and plasmids, and develops machine learning methods for HGT analysis.
Yuxin
Ning
PhD student
Yuxin studies simulation-based inference in population genetics and pangenomes.
Leonie Wehnert
Master student
looks at pangenome graph construction in plant pangenomes.
Yamin Mazou
bachelor student
works on simulations and visualization of mutation patterns.
former group members
Klara
Burger
PhD student
developed and analyzed machine learning applications and model-based approaches in population genetics.
Now at Roche Pharma AG.
Sandrine Wayou Fossouo
visiting master student
Sandrine is working on the evolution of mutation rates in fluctuating environments
Christian Resl
master student
Chris is looking at gene-co-occurrence in neutrally evolving populations.
Jules Kreuer
master student
Jules is looking into the effect of horizontal gene transfer on pangenomes.
Philip Höllein
master student
Philip worked on simulations for plant breeding schemes and selfing species.
Huiting Xu
master student
Huiting is working on the interpretability of CNNs in population genetics.
Emile
Barbe
student assistant
Emile is working on a shiny app for forensic ancestry classification.
former group members
Klara
Burger
PhD student
developed and analyzed machine learning applications and model-based approaches in population genetics.
Now at Roche Pharma AG.
Sandrine Wayou Fossouo
visiting master student
Sandrine is working on the evolution of mutation rates in fluctuating environments
Christian Resl
master student
Chris is looking at gene-co-occurrence in neutrally evolving populations.
Jules Kreuer
master student
Jules is looking into the effect of horizontal gene transfer on pangenomes.
Philip Höllein
master student
Philip worked on simulations for plant breeding schemes and selfing species.
Huiting Xu
master student
Huiting is working on the interpretability of CNNs in population genetics.
Emile
Barbe
student assistant
Emile is working on a shiny app for forensic ancestry classification.
colleagues and collaborators
I am part of the SPP2141 CRISPR-Cas functions beyond defence
University of Freiburg
- Peter Pfaffelhuber
- Rolf Backofen
- HESS LAB - Genetics & Experimental Bioinformatics
- Fabian Staubach
- Omer Alkhnbashi
